Distinct transcriptomic reprogramming in the wheat stripe rust fungus during the initial infection of wheat and barberry.
Identifieur interne : 000184 ( Main/Exploration ); précédent : 000183; suivant : 000185Distinct transcriptomic reprogramming in the wheat stripe rust fungus during the initial infection of wheat and barberry.
Auteurs : Jing Zhao [République populaire de Chine] ; Wanlu Duan [Oman] ; Yiwen Xu [Oman] ; Ce Zhang [Oman] ; Long Wang [Oman] ; Jierong Wang [Oman] ; Song Tian [Oman] ; Guoliang Pei [République populaire de Chine] ; Gangming Zhan [République populaire de Chine] ; Hua Zhuang [République populaire de Chine] ; Jie Zhao [République populaire de Chine] ; Zhensheng Kang [République populaire de Chine]Source :
- Molecular plant-microbe interactions : MPMI [ 0894-0282 ] ; 2020.
Abstract
Puccinia striiformis f. sp. tritici (Pst) is the causal agent of wheat stripe rust that causes severe yield losses all over the world. As a macrocyclic heteroecious rust fungus, it is able to infect two unrelated host plants: wheat and barberry. Its urediniospores infect wheat and cause disease epidemic, while its basidiospores parasitize barberry to fulfill the sexual reproduction. This complex life cycle poses interesting questions on the different mechanisms of pathogenesis underlying the infection of the two different hosts. In the present study, transcriptomes of Pst during the initial infection of wheat and barberry leaves were qualitatively and quantitatively compared. As a result, 142 wheat-specific expressed genes (WEGs) were identified, which was far less than 2,677 barberry-specifically expressed genes (BEGs). A larger proportion of evolutionary conserved genes were observed in BEGs than that in WEGs, implying a longer history of the interaction between Pst and barberry. Additionally, Pst differentially expressed genes (DEGs) between wheat at 1 dpi/2 dpi and barberry at 3 dpi/ 4dpi were identified by quantitative analysis. Gene Ontology analysis of these DEGs and expression patterns of Pst pathogenic genes, including those encoding candidate secreted effectors, cell wall degrading enzymes, and nutrient transporters, demonstrated that urediniospores and basidiospores exploited distinct strategies to overcome host defense systems. These results represent the first analysis of the Pst transcriptome in barberry and contribute to a better understanding of the evolutionary processes and strategies of different types of rust spores during the infection process on different hosts.
DOI: 10.1094/MPMI-08-20-0244-R
PubMed: 33118856
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Distinct transcriptomic reprogramming in the wheat stripe rust fungus during the initial infection of wheat and barberry.</title><author><name sortKey="Zhao, Jing" sort="Zhao, Jing" uniqKey="Zhao J" first="Jing" last="Zhao">Jing Zhao</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhaojing@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Duan, Wanlu" sort="Duan, Wanlu" uniqKey="Duan W" first="Wanlu" last="Duan">Wanlu Duan</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 1564141196@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Yiwen" sort="Xu, Yiwen" uniqKey="Xu Y" first="Yiwen" last="Xu">Yiwen Xu</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 1045796010@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Ce" sort="Zhang, Ce" uniqKey="Zhang C" first="Ce" last="Zhang">Ce Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 2946561376@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Long" sort="Wang, Long" uniqKey="Wang L" first="Long" last="Wang">Long Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; favourite-521@163.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Jierong" sort="Wang, Jierong" uniqKey="Wang J" first="Jierong" last="Wang">Jierong Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 2364024178@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Tian, Song" sort="Tian, Song" uniqKey="Tian S" first="Song" last="Tian">Song Tian</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 215307815@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Pei, Guoliang" sort="Pei, Guoliang" uniqKey="Pei G" first="Guoliang" last="Pei">Guoliang Pei</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; peiguoliang@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhan, Gangming" sort="Zhan, Gangming" uniqKey="Zhan G" first="Gangming" last="Zhan">Gangming Zhan</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhangangming@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhuang, Hua" sort="Zhuang, Hua" uniqKey="Zhuang H" first="Hua" last="Zhuang">Hua Zhuang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhuanghuaok@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhao, Jie" sort="Zhao, Jie" uniqKey="Zhao J" first="Jie" last="Zhao">Jie Zhao</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; jiezhao@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Kang, Zhensheng" sort="Kang, Zhensheng" uniqKey="Kang Z" first="Zhensheng" last="Kang">Zhensheng Kang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; kangzs@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:33118856</idno><idno type="pmid">33118856</idno><idno type="doi">10.1094/MPMI-08-20-0244-R</idno><idno type="wicri:Area/Main/Corpus">000029</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000029</idno><idno type="wicri:Area/Main/Curation">000029</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000029</idno><idno type="wicri:Area/Main/Exploration">000029</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Distinct transcriptomic reprogramming in the wheat stripe rust fungus during the initial infection of wheat and barberry.</title><author><name sortKey="Zhao, Jing" sort="Zhao, Jing" uniqKey="Zhao J" first="Jing" last="Zhao">Jing Zhao</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhaojing@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Duan, Wanlu" sort="Duan, Wanlu" uniqKey="Duan W" first="Wanlu" last="Duan">Wanlu Duan</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 1564141196@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Yiwen" sort="Xu, Yiwen" uniqKey="Xu Y" first="Yiwen" last="Xu">Yiwen Xu</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 1045796010@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Ce" sort="Zhang, Ce" uniqKey="Zhang C" first="Ce" last="Zhang">Ce Zhang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 2946561376@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Long" sort="Wang, Long" uniqKey="Wang L" first="Long" last="Wang">Long Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; favourite-521@163.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Jierong" sort="Wang, Jierong" uniqKey="Wang J" first="Jierong" last="Wang">Jierong Wang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 2364024178@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Tian, Song" sort="Tian, Song" uniqKey="Tian S" first="Song" last="Tian">Song Tian</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 215307815@qq.com.</nlm:affiliation><country wicri:rule="url">Oman</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Pei, Guoliang" sort="Pei, Guoliang" uniqKey="Pei G" first="Guoliang" last="Pei">Guoliang Pei</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; peiguoliang@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhan, Gangming" sort="Zhan, Gangming" uniqKey="Zhan G" first="Gangming" last="Zhan">Gangming Zhan</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhangangming@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhuang, Hua" sort="Zhuang, Hua" uniqKey="Zhuang H" first="Hua" last="Zhuang">Hua Zhuang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhuanghuaok@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Zhao, Jie" sort="Zhao, Jie" uniqKey="Zhao J" first="Jie" last="Zhao">Jie Zhao</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; jiezhao@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author><author><name sortKey="Kang, Zhensheng" sort="Kang, Zhensheng" uniqKey="Kang Z" first="Zhensheng" last="Kang">Zhensheng Kang</name><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; kangzs@nwsuaf.edu.cn.</nlm:affiliation><country wicri:rule="url">République populaire de Chine</country><wicri:regionArea>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi</wicri:regionArea><wicri:noRegion>Shaanxi</wicri:noRegion></affiliation></author></analytic><series><title level="j">Molecular plant-microbe interactions : MPMI</title><idno type="ISSN">0894-0282</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Puccinia striiformis f. sp. tritici (Pst) is the causal agent of wheat stripe rust that causes severe yield losses all over the world. As a macrocyclic heteroecious rust fungus, it is able to infect two unrelated host plants: wheat and barberry. Its urediniospores infect wheat and cause disease epidemic, while its basidiospores parasitize barberry to fulfill the sexual reproduction. This complex life cycle poses interesting questions on the different mechanisms of pathogenesis underlying the infection of the two different hosts. In the present study, transcriptomes of Pst during the initial infection of wheat and barberry leaves were qualitatively and quantitatively compared. As a result, 142 wheat-specific expressed genes (WEGs) were identified, which was far less than 2,677 barberry-specifically expressed genes (BEGs). A larger proportion of evolutionary conserved genes were observed in BEGs than that in WEGs, implying a longer history of the interaction between Pst and barberry. Additionally, Pst differentially expressed genes (DEGs) between wheat at 1 dpi/2 dpi and barberry at 3 dpi/ 4dpi were identified by quantitative analysis. Gene Ontology analysis of these DEGs and expression patterns of Pst pathogenic genes, including those encoding candidate secreted effectors, cell wall degrading enzymes, and nutrient transporters, demonstrated that urediniospores and basidiospores exploited distinct strategies to overcome host defense systems. These results represent the first analysis of the Pst transcriptome in barberry and contribute to a better understanding of the evolutionary processes and strategies of different types of rust spores during the infection process on different hosts.</div></front></TEI><pubmed><MedlineCitation Status="Publisher" Owner="NLM"><PMID Version="1">33118856</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>29</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0894-0282</ISSN><JournalIssue CitedMedium="Print"><PubDate><Year>2020</Year><Month>Oct</Month><Day>29</Day></PubDate></JournalIssue><Title>Molecular plant-microbe interactions : MPMI</Title><ISOAbbreviation>Mol Plant Microbe Interact</ISOAbbreviation></Journal><ArticleTitle>Distinct transcriptomic reprogramming in the wheat stripe rust fungus during the initial infection of wheat and barberry.</ArticleTitle><ELocationID EIdType="doi" ValidYN="Y">10.1094/MPMI-08-20-0244-R</ELocationID><Abstract><AbstractText>Puccinia striiformis f. sp. tritici (Pst) is the causal agent of wheat stripe rust that causes severe yield losses all over the world. As a macrocyclic heteroecious rust fungus, it is able to infect two unrelated host plants: wheat and barberry. Its urediniospores infect wheat and cause disease epidemic, while its basidiospores parasitize barberry to fulfill the sexual reproduction. This complex life cycle poses interesting questions on the different mechanisms of pathogenesis underlying the infection of the two different hosts. In the present study, transcriptomes of Pst during the initial infection of wheat and barberry leaves were qualitatively and quantitatively compared. As a result, 142 wheat-specific expressed genes (WEGs) were identified, which was far less than 2,677 barberry-specifically expressed genes (BEGs). A larger proportion of evolutionary conserved genes were observed in BEGs than that in WEGs, implying a longer history of the interaction between Pst and barberry. Additionally, Pst differentially expressed genes (DEGs) between wheat at 1 dpi/2 dpi and barberry at 3 dpi/ 4dpi were identified by quantitative analysis. Gene Ontology analysis of these DEGs and expression patterns of Pst pathogenic genes, including those encoding candidate secreted effectors, cell wall degrading enzymes, and nutrient transporters, demonstrated that urediniospores and basidiospores exploited distinct strategies to overcome host defense systems. These results represent the first analysis of the Pst transcriptome in barberry and contribute to a better understanding of the evolutionary processes and strategies of different types of rust spores during the infection process on different hosts.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>Jing</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhaojing@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duan</LastName><ForeName>Wanlu</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 1564141196@qq.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>Yiwen</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 1045796010@qq.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Ce</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 2946561376@qq.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Long</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; favourite-521@163.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Jierong</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 2364024178@qq.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tian</LastName><ForeName>Song</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China; 215307815@qq.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pei</LastName><ForeName>Guoliang</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; peiguoliang@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhan</LastName><ForeName>Gangming</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhangangming@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhuang</LastName><ForeName>Hua</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; zhuanghuaok@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>Jie</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; jiezhao@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kang</LastName><ForeName>Zhensheng</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>Northwest A&F University, 12469, College of Plant Protection, Yangling, Shaanxi, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Northwest A&F University, 12469, State Key Laboratory of Crop Stress Biology for Arid Areas, Yangling, Shaanxi, China; kangzs@nwsuaf.edu.cn.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>10</Month><Day>29</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Mol Plant Microbe Interact</MedlineTA><NlmUniqueID>9107902</NlmUniqueID><ISSNLinking>0894-0282</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>10</Month><Day>29</Day><Hour>12</Hour><Minute>10</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>10</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>10</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>aheadofprint</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">33118856</ArticleId><ArticleId IdType="doi">10.1094/MPMI-08-20-0244-R</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Oman</li><li>République populaire de Chine</li></country></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Zhao, Jing" sort="Zhao, Jing" uniqKey="Zhao J" first="Jing" last="Zhao">Jing Zhao</name></noRegion><name sortKey="Kang, Zhensheng" sort="Kang, Zhensheng" uniqKey="Kang Z" first="Zhensheng" last="Kang">Zhensheng Kang</name><name sortKey="Kang, Zhensheng" sort="Kang, Zhensheng" uniqKey="Kang Z" first="Zhensheng" last="Kang">Zhensheng Kang</name><name sortKey="Pei, Guoliang" sort="Pei, Guoliang" uniqKey="Pei G" first="Guoliang" last="Pei">Guoliang Pei</name><name sortKey="Zhan, Gangming" sort="Zhan, Gangming" uniqKey="Zhan G" first="Gangming" last="Zhan">Gangming Zhan</name><name sortKey="Zhan, Gangming" sort="Zhan, Gangming" uniqKey="Zhan G" first="Gangming" last="Zhan">Gangming Zhan</name><name sortKey="Zhao, Jie" sort="Zhao, Jie" uniqKey="Zhao J" first="Jie" last="Zhao">Jie Zhao</name><name sortKey="Zhao, Jie" sort="Zhao, Jie" uniqKey="Zhao J" first="Jie" last="Zhao">Jie Zhao</name><name sortKey="Zhao, Jing" sort="Zhao, Jing" uniqKey="Zhao J" first="Jing" last="Zhao">Jing Zhao</name><name sortKey="Zhuang, Hua" sort="Zhuang, Hua" uniqKey="Zhuang H" first="Hua" last="Zhuang">Hua Zhuang</name><name sortKey="Zhuang, Hua" sort="Zhuang, Hua" uniqKey="Zhuang H" first="Hua" last="Zhuang">Hua Zhuang</name></country><country name="Oman"><noRegion><name sortKey="Duan, Wanlu" sort="Duan, Wanlu" uniqKey="Duan W" first="Wanlu" last="Duan">Wanlu Duan</name></noRegion><name sortKey="Tian, Song" sort="Tian, Song" uniqKey="Tian S" first="Song" last="Tian">Song Tian</name><name sortKey="Wang, Jierong" sort="Wang, Jierong" uniqKey="Wang J" first="Jierong" last="Wang">Jierong Wang</name><name sortKey="Wang, Long" sort="Wang, Long" uniqKey="Wang L" first="Long" last="Wang">Long Wang</name><name sortKey="Xu, Yiwen" sort="Xu, Yiwen" uniqKey="Xu Y" first="Yiwen" last="Xu">Yiwen Xu</name><name sortKey="Zhang, Ce" sort="Zhang, Ce" uniqKey="Zhang C" first="Ce" last="Zhang">Ce Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PlantPathoEffV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000184 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000184 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PlantPathoEffV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:33118856
|texte= Distinct transcriptomic reprogramming in the wheat stripe rust fungus during the initial infection of wheat and barberry.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:33118856" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PlantPathoEffV1
| This area was generated with Dilib version V0.6.38. |  |